Row | Genomic position/rs ID | Transcript consequence | Protein consequence | Exon/ Intron | Pathogenicity (based on Infevers db) | Allele frequency (%) |
---|---|---|---|---|---|---|
Common mutations | Â | |||||
1 | 16:3293407 T/C (rs61752717) | c.2080A > G | p.Met694Val (p.M694V) | Exon10 | Pathogenic | 1725 (20.27) |
2 | 16:3304626 C/G (rs3743930) | c.442G > C | p.Glu148Gln (p.E148Q) | Exon2 | VUS | 874 (10.27) |
3 | 16:3293310 A/G (rs28940579) | c.2177T > C | p.Val726Ala (p.V726A) | Exon10 | Pathogenic | 701 (8.24) |
4 | 16:3293447 C/G or T (rs28940580) | c.2040G > C or c.2040G > A | p.Met680Ile (p.M680I) | Exon10 | Pathogenic | 613 (7.20) |
5 | 16:3293205 C/T (rs104895097) | c.2282G > A | p.Arg761His (p.R761H) | Exon10 | Likely pathogenic | 179 (2.10) |
6 | 16:3293405 C/T (rs28940578) | c.2082G > A | p.Met694Ile (p.M694I) | Exon10 | Pathogenic | 179 (2.10) |
7 | 16:3299586 G/A (rs11466023) | c.1105C > T | p.Pro369Ser (p.P369S) | Exon3 | VUS | 42 (0.49) |
8 | 16:3293257 C/A (rs61732874) | c.2230G > T | p.Ala744Ser (p.A744S) | Exon10 | VUS | 38 (0.45) |
9 | 16:3297166 G/C (rs104895083) | c.1437C > G | p.Phe479Leu (p.F479L) | Exon5 | Likely pathogenic | 15 (0.18) |
Detected mutated alleles | Â | Â | Â | Â | 4366 (51.29) | |
Total alleles | Â | Â | Â | Â | 8512 (100.00) | |
Rare mutations | Â | |||||
10 | 16:3299468 C/T (rs11466024) | c.1223G > A | p.Arg408Gln (p.R408Q) | Exon3 | VUS | Rare |
11 | 16:3304567 C/G (rs104895079) | c.501G > C | p.Glu167Asp (p.E167D) | Exon2 | Likely pathogenic | Rare |
12 | 16:3293403T/C (rs104895094) | c.2084A > G | p.Lys695Arg (p.K695R) | Exon10 | Likely pathogenic | Rare |
13 | 16:3293633 C/G (rs766576175) | c.1854G > C | p.Lys618Asn (p.K618N) | Exon10 | NA | Rare |
14 | 16:3293409_3293411delATT (rs104895093) | c.2076_2078del | p.Ile692del (p.I692Del) | Exon10 | Likely pathogenic | Rare |
15 | 16:3293592 C/G (rs967990798) | c.1895G > C | p.Gly632Ala (p.G632A) | Exon10 | Likely benign | Rare |
16 | 16:3293340T/A (rs1596349932) | c.2147A > T | p.Lys716Met (p.K716M) | Exon10 | NA | Rare |
17 | 16:3293646 G/A (rs1332372034) | c.1841C > T | p.Ser614Phe (p.S614F) | Exon10 | NA | Rare |
18 | 16:3304661 C/T (rs876660989) | c.407G > A | p.Gly136Glu (p.G136E) | Exon2 | VUS | Rare |
19 | 16:3304168 A/C | c.900T > G | p.His300Gln (p.H300Q) | Exon2 | NA | Rare |
20 | 16:3306392 C/G (rs765151968) | c.196G > C | p.Ala66Pro (p.A66P) | Exon1 | NA | Rare |
21 | 16:3304464 G/A | c.604C > T | p.Arg202Trp (p.R202W) | Exon2 | NA | Rare |
22 | 16:3293529 C/T (rs104895085) | c.1958G > A | p.Arg653His (p.R653H) | Exon10 | VUS | Rare |
23 | 16:3293463 C/T (rs104895087) | c.2024G > A | p.Ser675Asn (p.S675N) | Exon10 | Likely benign | Rare |
24 | 16:3293454 C/T (rs104895088) | c.2033G > A | p.Gly678Glu (p.G678E) | Exon10 | VUS | Rare |
25 | 16:3293449T/G (rs104895089) | c.2038A > C | p.Met680Leu (p.M680L) | Exon10 | Likely pathogenic | Rare |
26 | 16:3293327 G/C (rs104895102) | c.2160C > G | p.Ile720Met (p.I720M) | Exon10 | VUS | Rare |
27 | 16:3293407T/A (rs61752717) | c.2080A > T | p.Met694Leu (p.M694L) | Exon10 | Likely pathogenic | Rare |
28 | 16:3293445 G/A (rs104895090) | c.2042C > T | p.Thr681Ile (p.T681I) | Exon10 | VUS | Rare |
29 | 16:3304529 G/C (rs104895134) | c.539C > G | p.Pro180Arg (p.P180R) | Exon2 | VUS | Rare |
30 | 16:3304202 G/A (rs104895132) | c.866C > T | p.Ala289Val (p.A289V) | Exon2 | VUS | Rare |
31 | 16:3304457 C/T (rs775663363) | c.611G > A | p.Arg204His (p.R204H) | Exon2 | Not classified | Rare |
32 | 16:3304725 G/T (rs147557169) | c.343C > A | p.Pro115Thr (p.P115T) | Exon2 | Likely benign | Rare |
33 | 16:3304158 C/T (rs75977701) | c.910G > A | p.Gly304Arg (p.G304R) | Exon2 | Likely benign | Rare |
34 | 16:3304380 C/T (rs104895080) | c.688G > A | p.Glu230Lys (p.E230K) | Exon2 | VUS | Rare |
35 | 16:3297080 A/T | c.1523T > A | p.Leu508Gln (p.L508Q) | Exon5 | VUS | Rare |
36 | 16:3299754 G/A (rs771254090) | c.937C > T | p.Pro313Ser (p.P313S) | Exon3 | NA | Rare |
37 | 16:3299762 G/T | c.929C > A | p.Ala310Asp (p.A310D) | Exon3 | NA | Rare |
38 | 16:3293542 G/A | c.1945C > T | p.Leu649Phe (p.L649F) | Exon10 | Not classified | Rare |