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Egyptian Journal of Medical Human Genetics

Table 1 List of tools employed for combined analysis using preliminary tools

From: In silico profiling of non-synonymous SNPs in IDS gene for early diagnosis of Hunter syndrome

S. no.

Preliminary tools

Prediction mechanism

1

SIFT

(https://sift.bii.a-star.edu.sg/www/SIFT_seq_submit2.html) [15]

Sequence-homology

2

PolyPhen 2.0

(http://genetics.bwh.harvard.edu/pph2/) [16]

Structure-homology

3

PANTHER

(http://www.pantherdb.org/tools/csnpScore.do) [17]

Hidden Markov model

4

I-Mutant 3.0

(http://gpcr2.biocomp.unibo.it/cgi/predictors/I-Mutant3.0/I-Mutant3.0.cgi) [18]

Support vector machine

5

PMut

(https://mmb.irbbarcelona.org/PMut/pymut) [19]

Neural-network

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