Table 1 Marker checks of the studied SNPs
Gene | MIR146A | MIR499/MIR499A | MTMR3 | MIR155HG | IRAK1 | PADI4 |
|---|---|---|---|---|---|---|
ID | rs2910164 | rs3746444 | rs12537 | rs767649 | rs3027898 | rs1748033 |
Position | 160,485,411 | 34,990,448 | 30,027,471 | 25,572,410 | 154,010,439 | 17,336,167 |
Chromosome | 5 | 20 | 22 | 21 | X | 1 |
Alleles, major: minor | C:G | T:C | C:T | A:T | A:C | C:T |
Genotype % | 100% | 100% | 100% | 100% | 100% | 100% |
MAF | 0.39 | 0.48 | 0.45 | 0.54 | 0.6 | 0.71 |
ObsHET | 46.0 | 49.0 | 50.0 | 64.0 | 26.0 | 6.0 |
PedHET | 47.9 | 50.4 | 49.9 | 50.1 | 48.3 | 41.3 |
HWE p value (controls) | 0.48 | 0.56 | 0.02 | 0.00 | 0.00 | 0.00 |