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Table 2 Copy number variations of SMN2 and NAIP genes in controls (n = 57) and SMA patients (n = 148) with homozygous deletion of exon 7 of SMN1 gene

From: MLPA analysis for molecular diagnosis of spinal muscular atrophy and correlation of 5q13.2 genes with disease phenotype in Egyptian patients

Modifier gene

Copy no.

Patients

(n = 148)

Controls

(n = 57)

P value

SMN2

exon 7

0

 

6 (10.5%)

< 0.001*

1

 

11 (19.3%)

2

34 (23.0%)

24 (42.1%)

3

38 (25.7%)

10 (17.5%)

4

68 (45.9%)

5 (8.8%)

5

3 (2.0%)

1 (1.8%)

6

5 (3.4%)

 

SMN2

exon 8

0

 

5 (8.8%)

< 0.001*

1

1 (0.7%)

9 (15.8%)

2

42 (28.4%)

22 (38.6%)

3

46 (31.1%)

20 (35.1%)

4

53 (35.8%)

1 (1.8%)

5

3 (2.0%)

 

6

3 (2.0%)

 

NAIP exon 5

0

49 (33.1%)

1 (1.8%)

 < 0.001*

1

51 (34.5%)

4 (7.0%)

2

47 (31.8%)

36 (63.2%)

3

1 (0.7%)

16 (28.1%)