Egyptian Journal of Medical Human Genetics

Table 4 Selected CTL and HTL epitopes of S and N proteins for vaccine structure design

From: Design of a multi-epitope-based peptide vaccine against the S and N proteins of SARS-COV-2 using immunoinformatics approach

	N protein					S protein
	Peptide sequence	Position	Allergenicity	Toxicity	VaxiJen score	Peptide sequence	Position	Allergenicity	Toxicity	VaxiJen score
CTL epitopes	GMSRIGMEV	316	NON-ALLERGEN	Non-Toxin	0.6287	TLDSKTQSL	109	NON-ALLERGEN	Non-Toxin	1.0685
	GDAALALLL	215	NON-ALLERGEN	Non-Toxin	0.4529	GVGYQPYRV	502	NON-ALLERGEN	Non-Toxin	1.3587
	SPRWYFYYL	105	NON-ALLERGEN	Non-Toxin	0.7340	LPFNDGVYF	84	NON-ALLERGEN	Non-Toxin	0.5593
	GPEQTQGNF	278	NON-ALLERGEN	Non-Toxin	0.7349	VLSFELLH	512	NON-ALLERGEN	Non-Toxin	1.0776
	LALLLLDRL	219	NON-ALLERGEN	Non-Toxin	0.5933
HTL epitopes	KQQTVTLLPAADLDD	388	NON-ALLERGEN	Non-Toxin	0.6264	GINITRFQTLLALHR	232	NON-ALLERGEN	Non-Toxin	0.5582
						VLSFELLHAPATVCG	512	NON-ALLERGEN	Non-Toxin	0.4784
						FSNVTWFHAIHVSGT	59	NON-ALLERGEN	Non-Toxin	0.7533
						TESIVRFPNITNLCP	323	NON-ALLERGEN	Non-Toxin	0.6128

Overlapping sequence of CTL and HTL epitopes sequences was bolded

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