From: An investigation of 6-Shogaol effects on MCF7 cell lines through a systems biology approach
VariableName | PATHOLOGY_T_STAGE | PATHOLOGY_N_STAGE | PATHOLOGY_M_STAGE | ||||||
---|---|---|---|---|---|---|---|---|---|
ResultType | SpearmanCorr | corrP | Q | SpearmanCorr | corrP | Q | Wilcoxon test P | Q | AUC |
ASCL1 | 0.0562 | 0.1987 | 0.473 | − 0.006 | 0.8925 | 0.965 | 0.5857 | 0.999 | 0.5413 |
CDH12 | 0.0614 | 0.1603 | 0.425 | 0.022 | 0.6187 | 0.849 | 0.5555 | 0.999 | 0.5447 |
ADH7 | − 0.048 | 0.2725 | 0.557 | − 0.0226 | 0.6081 | 0.843 | 0.7523 | 0.999 | 0.524 |
ARL2BP | − 0.0316 | 0.4704 | 0.722 | 0.0797 | 0.07081 | 0.338 | 0.3758 | 0.999 | 0.5671 |
ARL6IP6 | − 0.0764 | 0.08062 | 0.303 | − 0.0204 | 0.6442 | 0.862 | 0.3298 | 0.999 | 0.5739 |
BCL2L12 | 0.0855 | 0.05035 | 0.241 | 0.0276 | 0.5319 | 0.801 | 0.7442 | 0.999 | 0.5248 |
C5orf52 | Not available | Not available | Not available | Not available | Not available | Not available | Not available | Not available | Not available |
CREB3L1 | − 0.0431 | 0.325 | 0.608 | 0.1092 | 0.01319 | 0.151 | 0.3107 | 0.999 | 0.5768 |
CRELD1 | 0.0318 | 0.4681 | 0.721 | − 0.0278 | 0.5295 | 0.799 | 0.7828 | 0.999 | 0.5209 |
CTBS | − 0.1253 | 0.004059 | 0.0699 | − 0.1071 | 0.01499 | 0.162 | 0.4891 | 0.999 | 0.5525 |
DEPDC1B | 0.1125 | 0.009939 | 0.107 | 0.0155 | 0.7254 | 0.901 | 0.4444 | 0.999 | 0.558 |
DHX37 | 0.1048 | 0.01639 | 0.139 | 0.0424 | 0.3366 | 0.667 | 0.3918 | 0.999 | 0.5649 |
EHD2 | − 0.0543 | 0.2143 | 0.492 | 0.0489 | 0.2684 | 0.605 | 0.8616 | 0.999 | 0.5133 |
FAM83D | 0.1393 | 0.001387 | 0.0436 | 0.0753 | 0.08782 | 0.373 | 0.2772 | 0.999 | 0.5824 |
KIF4A | 0.182 | 2.77E−05 | 0.00861 | 0.0662 | 0.1334 | 0.447 | 0.1619 | 0.999 | 0.606 |
MRPL54 | 0.0342 | 0.4352 | 0.695 | 0.0484 | 0.2727 | 0.609 | 0.4138 | 0.999 | 0.562 |
MYCL1 | 0.069 | 0.1148 | 0.359 | − 0.029 | 0.5108 | 0.788 | 0.5585 | 0.999 | 0.5444 |
OR2G2 | 0.1089 | 0.0126 | 0.121 | 0.0649 | 0.1412 | 0.458 | 0.5839 | 0.999 | 0.5415 |
PALMD | − 0.0751 | 0.08602 | 0.311 | − 0.0586 | 0.1839 | 0.514 | 0.4686 | 0.999 | 0.5549 |
PPIF | − 0.0128 | 0.7698 | 0.904 | 0.012 | 0.785 | 0.925 | 0.147 | 0.999 | 0.6099 |
PSMG1(DSCR2) | 0.0416 | 0.3423 | 0.624 | − 0.0381 | 0.3888 | 0.709 | 0.8784 | 0.999 | 0.5116 |
RMDN2(FAM82A) | − 0.1211 | 0.005494 | 0.0803 | − 0.0259 | 0.5572 | 0.816 | 0.3933 | 0.999 | 0.5647 |
RPS23 | − 0.0542 | 0.2151 | 0.493 | − 0.0387 | 0.3809 | 0.702 | 0.01789 | 0.999 | 0.6794 |
SERPINA3 | − 0.0569 | 0.1938 | 0.467 | − 0.0669 | 0.1295 | 0.441 | 0.3289 | 0.999 | 0.574 |
TDRD9 | − 0.0371 | 0.3969 | 0.667 | 0.0776 | 0.07846 | 0.356 | 0.4551 | 0.999 | 0.5566 |
TMEM136 | − 0.0733 | 0.09355 | 0.324 | − 0.1036 | 0.01865 | 0.179 | 0.654 | 0.999 | 0.534 |
TMPRSS15(PRSS7) | 0.0734 | 0.09308 | 0.323 | 0.071 | 0.1077 | 0.409 | 0.932 | 0.999 | 0.5065 |
TRADD | 0.0769 | 0.07856 | 0.299 | 0.1267 | 0.003973 | 0.0906 | 0.187 | 0.999 | 0.6 |
YEATS4 | 0.0117 | 0.7893 | 0.913 | − 0.0594 | 0.1786 | 0.508 | 0.9511 | 0.999 | 0.5047 |
ZNF704 | 0.0012 | 0.9775 | 0.992 | 0.0525 | 0.2341 | 0.569 | 0.5741 | 0.999 | 0.5426 |
VariableName | YEARS_TO_BIRTH | RADIATION_THERAPY | NUMBER_OF_LYMPH_NODES | ||||||
---|---|---|---|---|---|---|---|---|---|
ResultType | SpearmanCorr | corrP | Q | Wilcoxon test P | Q | AUC | SpearmanCorr | corrP | Q |
ASCL1 | 0.0896 | 0.04105 | 0.123 | 0.08574 | 0.537 | 0.546 | − 0.0592 | 0.2332 | 0.665 |
ADH7 | 0.0174 | 0.6914 | 0.815 | 0.5353 | 0.892 | 0.5166 | − 0.0654 | 0.1873 | 0.623 |
ARL2BP | − 0.0165 | 0.708 | 0.826 | 0.7883 | 0.955 | 0.5072 | 0.1254 | 0.01124 | 0.237 |
ARL6IP6 | − 0.0721 | 0.1003 | 0.232 | 0.7802 | 0.953 | 0.5075 | − 0.0017 | 0.9723 | 0.994 |
BCL2L12 | − 0.1129 | 0.009983 | 0.0448 | 0.7943 | 0.956 | 0.507 | 0.0109 | 0.8255 | 0.959 |
C5orf52 | Not available | Not available | Not available | Not available | Not available | Not available | Not available | Not available | Not available |
CDH12 | − 0.0389 | 0.3757 | 0.559 | 0.4698 | 0.866 | 0.5194 | 0.0411 | 0.4072 | 0.783 |
CREB3L1 | 2.00E−04 | 0.9972 | 0.999 | 0.6371 | 0.918 | 0.5126 | 0.1392 | 0.004862 | 0.176 |
CRELD1 | 0.1039 | 0.01773 | 0.0676 | 8.06E−05 | 0.0913 | 0.6056 | − 0.0209 | 0.6733 | 0.904 |
CTBS | 0.0348 | 0.4282 | 0.606 | 0.005811 | 0.223 | 0.5739 | − 0.0467 | 0.347 | 0.748 |
DEPDC1B | − 0.0971 | 0.02679 | 0.0911 | 0.7703 | 0.952 | 0.5078 | 0.0194 | 0.6958 | 0.912 |
DHX37 | − 0.071 | 0.1059 | 0.241 | 0.1473 | 0.627 | 0.5388 | 0.0246 | 0.6208 | 0.884 |
EHD2 | − 0.0776 | 0.07715 | 0.193 | 0.9618 | 0.993 | 0.5013 | 0.0841 | 0.08976 | 0.488 |
FAM83D | − 0.1004 | 0.02206 | 0.079 | 0.8784 | 0.979 | 0.5041 | 0.0528 | 0.287 | 0.708 |
KIF4A | − 0.1073 | 0.0144 | 0.0579 | 0.879 | 0.98 | 0.5041 | 0.0482 | 0.3311 | 0.737 |
MRPL54 | 0.1897 | 1.33E−05 | 0.000391 | 0.3667 | 0.811 | 0.5242 | 0.1126 | 0.02294 | 0.303 |
MYCL1 | 0.1018 | 0.02028 | 0.0745 | 0.153 | 0.635 | 0.5383 | − 0.0501 | 0.3129 | 0.728 |
OR2G2 | 0.0974 | 0.02636 | 0.09 | 0.007625 | 0.24 | 0.5715 | 0.061 | 0.2186 | 0.653 |
PALMD | − 0.1313 | 0.002711 | 0.0177 | 0.7352 | 0.945 | 0.5091 | − 0.0345 | 0.4871 | 0.825 |
PPIF | − 0.0446 | 0.3103 | 0.497 | 0.22 | 0.709 | 0.5329 | − 0.0111 | 0.8231 | 0.958 |
PSMG1(DSCR2) | − 0.0767 | 0.08072 | 0.199 | 0.402 | 0.83 | 0.5225 | − 0.0683 | 0.1683 | 0.601 |
RMDN2(FAM82A) | 0.0162 | 0.7131 | 0.829 | 0.2962 | 0.767 | 0.528 | − 0.049 | 0.3231 | 0.732 |
RPS23 | 0.0925 | 0.03492 | 0.11 | 0.5689 | 0.902 | 0.5153 | − 0.0195 | 0.6949 | 0.911 |
SERPINA3 | 0.1289 | 0.003228 | 0.02 | 0.6112 | 0.912 | 0.5136 | − 0.0241 | 0.628 | 0.887 |
TDRD9 | − 0.0249 | 0.5703 | 0.725 | 0.08365 | 0.535 | 0.5464 | 0.0368 | 0.4585 | 0.81 |
TMEM136 | 0.0473 | 0.2819 | 0.467 | 0.8048 | 0.958 | 0.5066 | − 0.0819 | 0.09837 | 0.498 |
TMPRSS15(PRSS7) | 0.015 | 0.7329 | 0.842 | 0.4832 | 0.871 | 0.5188 | 0.0547 | 0.2702 | 0.696 |
TRADD | − 0.0593 | 0.1768 | 0.341 | 0.5873 | 0.906 | 0.5146 | 0.1027 | 0.03812 | 0.36 |
YEATS4 | 0.0419 | 0.3408 | 0.527 | 0.9355 | 0.988 | 0.5022 | − 0.0165 | 0.7396 | 0.929 |
ZNF704 | 0.1834 | 2.57E−05 | 0.000633 | 0.643 | 0.919 | 0.5124 | − 3.00E−04 | 0.9945 | 0.998 |
VariableName | HISTOLOGICAL_TYPE | RACE | ||||||
---|---|---|---|---|---|---|---|---|
ResultType | Kruskal_Wallis_P | Q | Kruskal_Wallis_P | Q | ||||
ASCL1 | 0.6302 | 0.715 | 0.4264 | 0.706 | ||||
CDH12 | 0.287 | 0.445 | 0.004113 | 0.108 | ||||
KIF4A | 5.29E−05 | 0.00132 | 0.00361 | 0.103 | ||||
PSMG1(DSCR2) | 6.92E−05 | 0.00159 | 0.251 | 0.593 | ||||
ZNF704 | 0.6903 | 0.759 | 0.05046 | 0.312 | ||||
BCL2L12 | 0.002162 | 0.0182 | 0.09876 | 0.41 | ||||
DEPDC1B | 0.001027 | 0.0108 | 0.04954 | 0.31 | ||||
ARL6IP6 | 0.1319 | 0.281 | 0.9639 | 0.982 | ||||
RMDN2(FAM82A) | 0.0006258 | 0.00758 | 0.01507 | 0.192 | ||||
FAM83D | 7.92E−07 | 7.97E−05 | 0.06783 | 0.353 | ||||
YEATS4 | 0.6501 | 0.729 | 0.6305 | 0.806 | ||||
PALMD | 0.001206 | 0.0121 | 0.003709 | 0.104 | ||||
ARL2BP | 0.8425 | 0.874 | 0.5415 | 0.762 | ||||
RPS23 | 0.004951 | 0.0321 | 3.05E−05 | 0.00937 | ||||
TMEM136 | 0.246 | 0.406 | 0.01884 | 0.209 | ||||
PPIF | 0.7755 | 0.823 | 0.4352 | 0.711 | ||||
DHX37 | 0.1737 | 0.333 | 0.2396 | 0.582 | ||||
ADH7 | 0.4253 | 0.563 | 0.1695 | 0.509 | ||||
TDRD9 | 0.004103 | 0.0283 | 0.008456 | 0.149 | ||||
MRPL54 | 0.8367 | 0.87 | 0.9014 | 0.949 | ||||
EHD2 | 0.001054 | 0.011 | 0.9842 | 0.992 | ||||
TRADD | 0.06848 | 0.188 | 0.7823 | 0.885 | ||||
C5orf52 | Not available | Not available | Not available | Not available | ||||
CREB3L1 | 0.3843 | 0.53 | 0.7106 | 0.849 | ||||
MYCL1 | 0.1923 | 0.352 | 0.7082 | 0.848 | ||||
TMPRSS15(PRSS7) | 0.6754 | 0.747 | 0.005527 | 0.122 | ||||
OR2G2 | 0.1753 | 0.334 | 0.002666 | 0.09 | ||||
CTBS | 0.8408 | 0.873 | 0.9667 | 0.983 | ||||
CRELD1 | 0.1945 | 0.355 | 0.2027 | 0.544 | ||||
SERPINA3 | 0.1757 | 0.335 | 0.06304 | 0.343 |